Yaroslav Blume - Selected Publications#

Rayevsky A., Bulgakov E., Sharifi M., Samofalova D., Ozheredov D., Karpov P., Pantano S., Blume Y. (2023) In silico induced effect of N-ε-lysine acetylation on microtubule stability and subsequent interaction of microtubule-associated proteins. Cell Biol. Intl., 47(9): 1547-1557. DOI: 10.1002/cbin.12052

Blume Y. (2023) My life under the star of biology. In: Life in Science (D. Breviario, J.A. Tuszynski, Eds), Springer, Cham, p. 1-17. DOI : 10.1007/978-3-031-23717-1_1

Kolupaev Y.E., Yemets A.I., Yastreb T.O., Blume Y.B. (2023) The role of nitric oxide and hydrogen sulfide in regulation of redox homeostasis at extreme temperatures in plants. Front. Plant. Sci., 14:1128439. doi: 10.3389/fpls.2023.1128439

Kravets E.A., Plokhovska S.G., Yemets A.I., Blume Y.B. (2023) UV-B Stress and plant sexual reproduction. In: UV-B Radiation and Crop Growth (Kataria S., Singh V.P., eds), Springer, Singapore, p. 293–317. https://doi.org/10.1007/978-981-19-3620-3_14

Plokhovska, S.H., Kravets, E.A., Yemets, A.I., Blume, Y.B. (2023) Crosstalk between melatonin and nitric oxide in plant development and UV-B stress response. In: UV-B Radiation and Crop Growth (Kataria S., Singh V.P., eds), Springer, Singapore, p. 319–339. https://doi.org/10.1007/978-981-19-3620-3_15

Karelov A., Kozub N., Sozinov I., Sozinova O., Pirko Y., Yemets A., Blume Y. (2022) Wheat genes associated with different types of resistance against stem rust (Puccinia graminis Pers.). Pathogens, 11(10): 1157. https://doi.org/10.3390/pathogens11101157

Blume R.Y., Rakhmetov D.B., Blume Y.B. (2022) Evaluation of Ukrainian Camelina sativa germplasm productivity and analysis of its amenability for efficient biodiesel production. Ind. Crops Prod., 187B: 115477. https://doi.org/10.1016/j.indcrop.2022.115477

Blume R.Y., Yemets A.I., Korkhovyi V., Radchuk V., Rakhmetov D.B., Blume Y.B. (2022) Genome-wide identification and analysis of cytokinin oxidase/dehydrogenase (ckx) gene family in finger millet (Eleusine coracana). Front. Genetics, 13:963789. doi: 10.3389/fgene.2022.963789

Yemets A., Plokhovska S., Pushkarova N., Blume Y. (2022) Quantum dot-antibody conjugates for immunofluorescence studies of biomolecules and subcellular structures. J. Fluoresc., 32: 1713–1723. https://doi.org/10.1007/s10895-022-02968-5

Rayevsky O., Samofalova D., Ishchenko L., Vygovska L., Mazur V., Labudzynskyi D.O., Borysov O., Spivak S., Ozheredov S., Bulgakov I., Stykhylias M., Blume Ya., Karpov P. Structure-based virtual screening and biological evaluation of novel inhibitors of Mycobacterium Z-ring formation. J. Cell. Biochem., 2022, 123(5):852-862. DOI:10.1002/jcb.30232. CORRIGENDUM. J Cell Biochem. 2022;123(9):1525. doi: 10.1002/jcb.30308

Vus K., Tarabara U., Danylenko I., Pirko Ya., Krupodorova T., Yemets A., Blume Ya., Turchenko V., Klymchuk D., Smertenko P., Zhytniakivska O., Trusova V., Petrushenko S., Bogatyrenko S., Gorbenko G. (2021) Silver nanoparticles as inhibitors of insulin amyloid formation: A fluorescence study. J. Mol. Liquids, Vol. 342, 15 November 2021, 117508 https://doi.org/10.1016/j.molliq.2021.117508

Kretynin S.V., Kolesnikov Ya.S., Derevyanchuk M.V., Kalachova T., Blume Ya.B., Khripach V.A., Kravets V.S. (2021) Brassinosteroids application induces phosphatidic acid production and modify antioxidant enzymes activity in tobacco in calcium-dependent manner. Steroids, 168: 108444. doi.org/10.1016/j.steroids.2019.108444

Borovaya M., Horiunova I., Plokhovska S., Pushkarova N., Blume Ya., Yemets A. (2021) Synthesis, properties, and bioimaging applications of silver-based quantum dots. Int. J. Mol. Sci., 22: 12202. DOI:10.3390/ijms222212202

Rayevsky A., Sharifi M., Samofalova D., Karpov P., Demchuk O., Blume Ya. (2021) In silico mechanistic model of microtubule assembly inhibition by selective chromone derivatives. J. Mol. Structure, 1241: 130633 https://doi.org/10.1016/j.molstruc.2021.130633

Yemets A, Horiunova I, Blume Ya (2021) Comparative analysis of cadmium, nickel, copper and zinc effects on actin filament organization in Arabidopsis root cells. Cell Biol. Intl., 45 (1): 211-226. doi: 10.1002/cbin.11485

Yamamoto S, Saito R, Nakamura S, Sogawa H, Karpov P, Shulga S, Blume Y, Kurita N (2020) Proposal of potent inhibitors for a bacterial cell-division protein FtsZ: molecular simulations based on molecular docking and ab initio molecular orbital calculations. Antibiotics, 9(12): 846. https://doi.org/10.3390/antibiotics9120846

Samofalova DO, Karpov PA, Raevsky OV, Blume YB (2020) Interplay of protein phosphatases with cytoskeleton signaling in response to stress factors in plants. In: Protein Phosphatases and Stress Management in Plants (Pandey G.K., Eds). Springer, Cham, 261-287. https://doi.org/10.1007/978-3-030-48733-1_14

Morello L, Pydiura N, Galinousky D, Blume Ya, Breviario D (2020) Flax tubulin and CesA superfamilies represent attractive and challenging targets for a variety of genome- and base-editing applications. Funct. Integrative Genomics, 20: 163–176. https://doi.org/10.1007/s10142-019-00667-2

Blyuss K, Chenar FF, Tsygankova VA, Biliavska L, Iutynska G, Yemets AI, Blume YB (2019) RNAi-based biocontrol of wheat nematodes using natural poly-component biostimulants. Front. Plant Sci., 10:483. doi: 10.3389/fpls.2019.00483

Sato R, Vohra S, Yamamoto S, Suzuki K, Karpov P, Shulga S, Blume Y, Kurita N (2020) Specific interactions between tau protein and curcumin derivatives: Molecular docking and ab initio molecular orbital simulations. J. Mol. Graphics Model., 8:107611. https://doi.org/10.1016/j.jmgm.2020.107611

Yemets A.I., Karpets Yu.V., Kolupaev Yu.E., Blume Ya.B. (2019) Emerging technologies for enhancing ROS/RNS homeostasis. In: Reactive Oxygen, Nitrogen and Sulfur Species in Plants: Production, Metabolism, Signaling and Defense Mechanisms (Eds M. Hasanuzzaman, V. Fotopoulos, K. Nahar, M. Fujita), John Wiley & Sons Ltd., p. 873-922. doi.org/10.1002/9781119468677.ch39

Rabokon A, Demkovych A, Sozinov A, Kozub N, Sozinov I, Pirko Ya, Blume Y (2019) Intron length polymorphism of β-tubulin genes of Aegilops biuncialis Vis. Cell Biol. Intl., 43: 1031-1039. doi: 10.1002/cbin.10886

Lytvyn D, Olenieva V, Yemets A, Bergounioux C, Blume Ya (2019) Tubulin acetylation accompanies autophagy development induced by different abiotic stimuli in Arabidopsis thaliana. Cell Biol. Intl., 43: 1056-1064. DOI: 10.1002/cbin.10842

Galinousky D, Padvitski T, Bayer G, Pirko Ya, Pydiura N, Anisimova N, Khotyleva L, Yemets A, Kilchevsky A, Blume Ya (2019) Expression analysis of cellulose synthase and main cytoskeletal protein genes in flax (Linum usitatissimum L.). Cell Biol. Intl., DOI: 10.1002/cbin.10837

Blume YaB, Krasylenko YuA, Yemets AI (2017) The role of plant cytoskeleton on phytohormone signaling under abiotic and biotic stresses. In: Mechanism of Plant Hormone Signaling Under Stress: A Functional Genomic Frontier. Vol. 2 (G. Pandey, Ed.). Wiley-Blackwell, 127-185.

Chudinova EM, Karpov PA, Fokin AI, Yemets AI, Lytvyn DI, Nadezhdina ES, Blume YaB (2017) MAST-like protein kinase IREH1 (At3g17850) from Arabidopsis thaliana binds to tubulin and co-localizes with the centrosome when expressed in animal cells. Planta, 246(5): 959–969. doi:10.1007/s00425-017-2742-4

Finiuk NS., Buziashvili AYu, Burlaka OM, Zaichenko OS, Mitina NY, Miagkota OS, Stoika RS, Blume YaB, Yemets AI (2017) Investigation of novel oligoelectrolyte polymer carriers for their capacity of DNA delivery into plant cells. Plant Cell, Tissue & Organ Culture, 131:27–39 DOI: 10.1007/s11240-017-1259-

Blume YaB, Krasylenko YuA, Yemets AI (2017) The role of plant cytoskeleton on phytohormone signaling under abiotic and biotic stresses. In: Mechanism of Plant Hormone Signaling Under Stress: A Functional Genomic Frontier. Vol. 2 (G. Pandey, Ed.). Wiley-Blackwell, 127-185. https://doi.org/10.1002/9781118889022.ch23

Derevyanchuk M, Kretynin S, Iakovenko O, Litvinovskaуа R, Zhabinskii V, Martinec J, Blume Ya, Khripach V, Kravets V (2017) Effect of 24-epibrassinolide on Brassica napus alternative respiratory pathway, guard cells movements and phospholipid signaling under salt stress. Steroids, 117: 16-24 (doi: http://dx.doi.org/10.1016/j.steroids.2016.11.006)

Raevsky AV, Sharifi M, Samofalova DA, Karpov PA, Blume YaB (2016) 3D structure prediction of histone acetyltransferase proteins of the MYST family and their interactome in Arabidopsis thaliana. J. Mol. Modeling, 22: 256 (doi: 10.1007/s00894-016-3103-0)

Lytvyn DI, Raynaud C, Yemets AI, Bergounioux C, Blume YaB (2016) Involvement of inositol biosynthesis and nitric oxide in the mediation of UV-B induced oxidative stress. Front. Plant Sci., 7: 430. doi: 10.3389/fpls.2016.00430. (IF 4.402)

Borovaya M, Naumenko AP, Burlaka OM, Blume YaB, Yemets AI. (2016) Extracellular synthesis of luminescent CdS quantum dots using plant cell culture. Nanoscale Res. Lett., 11(1): 100. doi: 10.1186/s11671-016-1314-z (IF 3.581)

Yemets AI, Krasylenko YA, Blume YB (2015) Nitric oxide and UV-B radiation. In: Nitric Oxide in Abiotic Stress Responses (Eds Khan M.N., Mobin M., Mohammad F., Corpas F.J.), Springer, p. 141-154.

Burlaka OM, Pirko YaV, Yemets AI, Blume YaB (2015) Plant genetic transformation using carbon nanotubes for DNA delivery. Cytol. Genet., 49(6): 349-357.

Borovaya MN, Pirko YaV, Krupodorova TA, Naumenko AP, Blume YaB, Yemets AI (2015) Biosynthesis of cadmium sulfide quantum dots using Pleurotus ostreatus (Jacq.) P. Kumm. Biotech. Biotechn. Equipment, 29(6): 1156-1163.

Tanasienko IV, Yemets AI, Finiuk NS, Stoika RR, Blume YB (2015) DMAEM-based cationic polymers as novel carriers for DNA delivery into cells. Cell Biol. Int. 39(3):243-245.

Borovaya MN, Naumenko AP, Matvieieva NA, Blume YaB, Yemets AI (2014) Biosynthesis of luminescent CdS quantum dots using plant hairy root culture. Nanoscale Res. Lett., 9: 686.

Yemets AI, Tanasienko IV, Krasylenko YuA, Blume YaB (2014) Plant-based biopharming of recombinant human lactoferrin. Cell Biol. Int., 38 (3): 989-1002.

Pokotylo IV, Kretynin SV., Khripach VA, Ruelland E, Blume YaB, Kravets VS (2014) Influence of 24-epibrassinolide on lipid signalling and metabolism in Brassica napus. Plant Growth Regul., 73(1): 9-17.

Blume YB, Krasylenko YA, Demchuk OM, Yemets AI (2013) Tubulin tyrosine nitration regulates microtubule organization in plant cells. Front. Plant Sci. 4:530. doi: 10.3389/fpls.2013.00530).

Krasylenko YuA, Yemets AI, Blume YaB (2013) Plant microtubules reorganization under inderect influence of enhanced UV-B irradiation and during UV-B induced programmed cell death. Plant Signalling & Behaviour, 8(5): 8:e24031 (PMID: 23438586; http://dx.doi.org/10.4161/psb.24031).

Radchuk V, Radchuk R, Pirko Y, Vankova R, Gaudinova A, Korkhovoy V, Yemets A, Weber H, Weschke W, Blume YB (2012) A somaclonal line SE7 of finger millet (Eleusine coracana) exhibits modified cytokinin homeostasis and increased grain yield. J. Exp. Bot., 63(15): 5497–5506.

Krasylenko YuA, Yemets AI, Sheremet YaA, Blume YaB (2012) Nitric oxide as a critical factor for perception of UV-B irradiation by microtubules in Arabidopsis. Physiol. Plant., (145): 505-515.

Yemets AI, Krasylenko YuA, Lytvyn DI, Sheremet YaA, Blume YaB (2011) Nitric oxide signaling via cytoskeleton in plants. Plant Sci., 181(5): 545-554.

Blume Ya, Yemets A, Sheremet Ya, Nyporko A, Sulimenko V, Sulimenko T, Draber P (2010) Exposure of beta-tubulin regions defined by antibodies on a Arabidopsis thaliana microtubule protofilament model and in the cells. BMC Plant Biology, 10:29 (DOI: 10.1186/1471-2229-10-29).

Karpov PA, Nadezhdina ES, Yemets AI, Matusov VG, Nyporko AYu, Shashina NYu, Blume YaB (2010) Bionformatic search of plant microtubule- and cell cycle related serine-threonine protein kinases. BMC Genomics, 11 (Suppl. 1): (DOI: 10.1186/1471-2164-11-S1-S14).

Lytvyn D, Yemets АІ, Blume YaB (2010) UV-B overexposure induces programmed cell death in a BY-2 tobacco cell line. Environm. Exp. Bot., 68: 51–57.

Blume YaB, Yemets АІ, Sulimenko V, Sulimenko T, Chan J, Lloyd C, Draber P (2008) Tyrosine phosphorylation of tubulin in plant cells. Planta, 229(1): 143-150.

Yemets АІ, Stelmakch ОО, Blume YaB (2008) Effects of the herbicide isopropyl-N-phenyl carbamate on microtubules and MTOCs in lines of Nicotiana sylvestris resistant and sensitive to its action. Cell Biol. Int., 32(6): 623-629.

Yemets АІ, Sheremet YaО, Visenberg К, Van Orden J, Verbelen J-P, Blume YaB (2008) Effects of tyrosine kinase and phosphatase inhibitors on microtubules in Arabidopsis root cells. Cell Biol. Int., 32(6): 630-637.

Yemets АІ, Radchuk VV, Bayer О, Bayer GYa, Pakhomov A, Baird VW, Blume YaB (2008) The development of transformation vectors based upon a modified plant α-tubulin gene as the selectable marker. Cell Biol. Int., 32(5): 566-570.

Radchuk V, Sreenivasulu N, Blume Ya, Weschke W (2007) Distinct tubulin genes are differentially expressed during barley grain development. Physiol. Plant., 131: 571–580.

Yemets А. І., Lloyd С., Blume Ya.B. (2008) Plant tubulin phosphorylation and its role in cell cycle progression. The Plant Cytoskeleton: Key Tool for Agro-Biotechnology (Eds Blume YaB, Baird W.V., Yemets AI, Breviario D.), Springer, p. 145-159.

Yemets А. І., Baird W.V., Blume Ya.B. (2008) Modified tubulin genes as selectable markers for plant transformation. The Plant Cytoskeleton: Key Tool for Agro-Biotechnology (Eds Blume YaB, Baird W.V., Yemets AI, Breviario D.), Springer, p. 435-454.

Blume YaB, Nyporko AYu, Yemets AI, (2006) Nitrotyrosination of -tubulin: structural analysis of functional significance in plants and animals. In: Cell Biology and Instrumentation: UV Radiation, Nitric Oxide and Cell Death in Plants (Eds Ya. Blume, D. Durzan and P.Smertenko), NATO Sci. Series, IOS Press, 2006, p. 325-333.

Blume YB, Yemets AI, Nyporko AYu, Baird WV (2003) Structural modelling of plant α-tubulin interaction with dinitroanilines and phosphoroamidates. Cell Biol. Int., 27: 171-174.

Yemets A, Klimkina L, Tarassenko L, Blume YB (2003) Efficient callus formation and plant regeneration of goosegrass [Eleusine indica (L.) Gaertn.]]. Plant Cell Rep., 21: 503-510.

Yemets AI, Kundelchuk OP, Smertenko AP, Solodushko VG, Rudas VA, Blume YB (2000) Transfer of amiprophosmethyl-resistance from Nicotiana plumbaginifolia mutant by somatic hybridization. Theor. Appl. Genet., 100: 847-857.

Baird W.V., Blume Ya.B., Wick S. (2000) Microtubular and cytoskeletal mutants. In: Plant microtubules: potential for biotechnology (P. Nick, ed.), Springer Verlag: Berlin - Heidelberg, p. 159-191.

Blume YB, Strashnyuk NM, Solodushko VG, Smertenko AP, Sidorov VA, Gleba YY (1998) Alteration of β-tubulin in Nicotiana plumbaginifolia confers resistance to amiprophos-methyl. Theor. Appl. Genet., 97: 464-472.

Smertenko A, Blume YaB, Viklicky V., Draber P (1997) Posttranslational modifications and multiple isoforms of tubulin in Nicotiana tabacum cells. Planta, 201: 349-358.

Smertenko A, Blume Ya, Viklicky V, Draber P (1997) Exposure of tubulin structural domains in Nicotiana tabacum microtubules probed by monoclonal antibodies. Eur. J. Cell Biol., 72: 104-112.

Yemets AI, Kundel'chuk OP, Smertenko AP, Solodushko VG, Blume Ya.B, Gleba YuYu (1996) Somatic hybrids of higher plants with usage of amiprophosmethyl-resistant mutant of Nicotiana plumbaginifolia. Rus. J. Genetics, 32: 1104-1111.